WormMine: Gene WBGene00197211

• WormBase Gene ID: WBGene00197211
• Gene Name: C06E2.11
• Sequence Name: C06E2.11
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by pgrn-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 92

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00197211

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C06E2.11	C06E2.11	92	X: 8882381-8882472

Other

0 CDSs

0 RNAi Result

10 Allele

• gk964260
• gk962707
• gk963732
• gk964126
• tm11356
• gk962626
• tm12640
• WBVar00081595
• WBVar02075421
• WBVar02079383

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00197211
• Start: 8882381
• End: 8882472
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_8882473..8886389
• Length (nt): 3917
• Chromosome Location: X: 8882473-8886389
• Organism: Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Genes differentially expressed in pgrn-1(tm985) and ced-1(e1735) but not in ced-3(n717) as compared to N2E.	Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%.	WBPaper00044246:pgrn-1_ced-1_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00197211
• Start: 8882381
• End: 8882472
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 92

1 Sequence Ontology Term