WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25B6.2.1 Sequence Name  T25B6.2.1
Length (nt)  2597   Chromosome Location  X: 9034554-9038547
Chromosome . Primary Identifier  X Chromosome Location . Start  9034554
Chromosome Location . End  9038547 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25B6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020788 nep-22 T25B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B6.2 T25B6.2 2397   X: 9034583-9034613

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25B6.2.1 9034554 9038547 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243384   60   X: 9034554-9034613 Caenorhabditis elegans
Exon243385   257   X: 9034664-9034920 Caenorhabditis elegans
Exon243386   156   X: 9035103-9035258 Caenorhabditis elegans
Exon243387   77   X: 9035484-9035560 Caenorhabditis elegans
Exon243388   163   X: 9035610-9035772 Caenorhabditis elegans
Exon243389   212   X: 9036214-9036425 Caenorhabditis elegans
Exon243390   133   X: 9036567-9036699 Caenorhabditis elegans
Exon243391   203   X: 9036745-9036947 Caenorhabditis elegans
Exon243392   181   X: 9037000-9037180 Caenorhabditis elegans
Exon243393   61   X: 9037227-9037287 Caenorhabditis elegans
Exon243394   773   X: 9037401-9038173 Caenorhabditis elegans
Exon243395   321   X: 9038227-9038547 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25B6.2.1 9034554 9038547 1

1 Sequence

Length
2597

1 Sequence Ontology Term

Identifier Name Description
transcript