WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47E1.2.1 Sequence Name  F47E1.2.1
Length (nt)  2404   Chromosome Location  X: 9057652-9061860
Chromosome . Primary Identifier  X Chromosome Location . Start  9057652
Chromosome Location . End  9061860 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47E1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018566 F47E1.2 F47E1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47E1.2 F47E1.2 2235   X: 9057660-9057807

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47E1.2.1 9057652 9061860 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243419   156   X: 9057652-9057807 Caenorhabditis elegans
Exon243420   61   X: 9057853-9057913 Caenorhabditis elegans
Exon243421   115   X: 9058053-9058167 Caenorhabditis elegans
Exon243422   138   X: 9058225-9058362 Caenorhabditis elegans
Exon243423   285   X: 9058930-9059214 Caenorhabditis elegans
Exon243426   244   X: 9059457-9059700 Caenorhabditis elegans
Exon243427   574   X: 9059841-9060414 Caenorhabditis elegans
Exon243428   87   X: 9060463-9060549 Caenorhabditis elegans
Exon243429   228   X: 9061025-9061252 Caenorhabditis elegans
Exon243430   295   X: 9061301-9061595 Caenorhabditis elegans
Exon243431   221   X: 9061640-9061860 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47E1.2.1 9057652 9061860 1

1 Sequence

Length
2404

1 Sequence Ontology Term

Identifier Name Description
transcript