WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.1 Sequence Name  C25A11.4a.1
Length (nt)  6044   Chromosome Location  X: 9082946-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9082946
Chromosome Location . End  9113613 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.1 9082946 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243424   139   X: 9082946-9083084 Caenorhabditis elegans
Exon243429   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243438   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243443   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243449   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243455   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243472   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243482   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243495   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243507   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243521   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243534   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243548   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243563   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243578   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243594   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243610   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243626   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243642   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243657   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243671   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243686   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243701   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243715   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243729   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243743   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243757   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243771   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243794   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.1 9082946 9113613 1

1 Sequence

Length
6044

1 Sequence Ontology Term

Identifier Name Description
transcript