WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.1 Sequence Name  C25A11.4a.1
Length (nt)  6044   Chromosome Location  X: 9082946-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9082946
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.1 9082946 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243458   139   X: 9082946-9083084 Caenorhabditis elegans
Exon243463   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243472   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243477   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243483   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243489   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243506   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243516   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243529   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243541   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243555   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243568   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243582   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243597   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243612   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243628   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243644   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243660   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243676   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243691   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243705   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243720   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243735   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243749   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243763   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243777   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243791   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243805   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243828   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.1 9082946 9113613 1

1 Sequence

Length
6044

1 Sequence Ontology Term

Identifier Name Description
transcript