WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4d.1 Sequence Name  C25A11.4d.1
Length (nt)  5898   Chromosome Location  X: 9082975-9113619
Chromosome . Primary Identifier  X Chromosome Location . Start  9082975
Chromosome Location . End  9113619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4d C25A11.4d 5595   X: 9082983-9083084

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4d.1 9082975 9113619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243460   110   X: 9082975-9083084 Caenorhabditis elegans
Exon243466   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243475   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243480   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243486   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243493   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243511   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243521   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243535   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243547   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243561   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243574   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243588   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243603   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243618   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243634   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243650   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243665   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243681   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243710   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243724   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243739   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243753   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243767   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243781   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243795   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243809   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243832   470   X: 9113150-9113619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4d.1 9082975 9113619 1

1 Sequence

Length
5898

1 Sequence Ontology Term

Identifier Name Description
transcript