WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.2 Sequence Name  C25A11.4a.2
Length (nt)  5558   Chromosome Location  X: 9090097-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9090097
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4a.2 9090097 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243482   166   X: 9090097-9090262 Caenorhabditis elegans
Exon243490   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243507   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243517   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243530   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243542   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243556   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243569   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243583   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243598   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243613   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243629   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243645   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243661   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243677   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243692   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243706   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243721   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243736   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243750   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243764   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243778   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243792   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243806   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243829   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4a.2 9090097 9113613 1

1 Sequence

Length
5558

1 Sequence Ontology Term

Identifier Name Description
transcript