WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4k.1 Sequence Name  C25A11.4k.1
Length (nt)  4935   Chromosome Location  X: 9092285-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9092285
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4k C25A11.4k 4935   X: 9092285-9092572

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4k.1 9092285 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243513   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243523   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243537   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243550   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243564   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243578   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243593   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243609   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243624   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243641   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243657   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243672   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243688   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243702   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243717   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243731   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243746   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243760   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243774   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243788   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243802   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243816   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243825   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4k.1 9092285 9113324 1

1 Sequence

Length
4935

1 Sequence Ontology Term

Identifier Name Description
transcript