WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4l.1 Sequence Name  C25A11.4l.1
Length (nt)  4710   Chromosome Location  X: 9094746-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9094746
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4l C25A11.4l 4710   X: 9094746-9094808

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4l.1 9094746 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243515   63   X: 9094746-9094808 Caenorhabditis elegans
Exon243524   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243538   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243551   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243565   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243579   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243594   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243610   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243625   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243642   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243658   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243673   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243689   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243703   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243718   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243732   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243747   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243761   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243775   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243789   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243803   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243817   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243826   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4l.1 9094746 9113324 1

1 Sequence

Length
4710

1 Sequence Ontology Term

Identifier Name Description
transcript