WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4h.1 Sequence Name  C25A11.4h.1
Length (nt)  4148   Chromosome Location  X: 9100251-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9100251
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4h C25A11.4h 4140   X: 9100259-9100369

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4h.1 9100251 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243567   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243577   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243591   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243606   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243621   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243638   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243654   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243669   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243685   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243699   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243714   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243728   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243743   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243757   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243771   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243785   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243799   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243813   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243822   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4h.1 9100251 9113324 1

1 Sequence

Length
4148

1 Sequence Ontology Term

Identifier Name Description
transcript