WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4e.1 Sequence Name  C25A11.4e.1
Length (nt)  3534   Chromosome Location  X: 9105515-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9105515
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4e C25A11.4e 3534   X: 9105515-9106296

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4e.1 9105515 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243627   782   X: 9105515-9106296 Caenorhabditis elegans
Exon243635   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243651   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243666   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243682   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243696   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243711   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243725   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243740   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243754   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243768   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243782   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243796   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243810   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243819   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4e.1 9105515 9113324 1

1 Sequence

Length
3534

1 Sequence Ontology Term

Identifier Name Description
transcript