WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0416.6.1 Sequence Name  B0416.6.1
Length (nt)  1715   Chromosome Location  X: 9293666-9296622
Chromosome . Primary Identifier  X Chromosome Location . Start  9293666
Chromosome Location . End  9296622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0416.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001638 gly-13 B0416.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0416.6 B0416.6 1350   X: 9294001-9294208

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0416.6.1 9293666 9296622 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244145   543   X: 9293666-9294208 Caenorhabditis elegans
Exon244146   113   X: 9294643-9294755 Caenorhabditis elegans
Exon244147   91   X: 9294805-9294895 Caenorhabditis elegans
Exon244148   150   X: 9294940-9295089 Caenorhabditis elegans
Exon244149   80   X: 9295337-9295416 Caenorhabditis elegans
Exon244150   110   X: 9295472-9295581 Caenorhabditis elegans
Exon244151   145   X: 9295627-9295771 Caenorhabditis elegans
Exon244152   109   X: 9295821-9295929 Caenorhabditis elegans
Exon244153   56   X: 9295981-9296036 Caenorhabditis elegans
Exon244154   45   X: 9296084-9296128 Caenorhabditis elegans
Exon244155   159   X: 9296304-9296462 Caenorhabditis elegans
Exon244156   114   X: 9296509-9296622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0416.6.1 9293666 9296622 -1

1 Sequence

Length
1715

1 Sequence Ontology Term

Identifier Name Description
transcript