WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01H11.1d.1 Sequence Name  E01H11.1d.1
Length (nt)  2587   Chromosome Location  X: 9364818-9386028
Chromosome . Primary Identifier  X Chromosome Location . Start  9364818
Chromosome Location . End  9386028 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01H11.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004033 pkc-2 E01H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01H11.1d E01H11.1d 2178   X: 9364925-9364933

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01H11.1d.1 9364818 9386028 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244265   116   X: 9364818-9364933 Caenorhabditis elegans
Exon244267   67   X: 9365036-9365102 Caenorhabditis elegans
Exon244269   99   X: 9365746-9365844 Caenorhabditis elegans
Exon244284   70   X: 9380052-9380121 Caenorhabditis elegans
Exon244290   101   X: 9380340-9380440 Caenorhabditis elegans
Exon244296   83   X: 9380582-9380664 Caenorhabditis elegans
Exon244302   241   X: 9380737-9380977 Caenorhabditis elegans
Exon244308   160   X: 9381132-9381291 Caenorhabditis elegans
Exon244314   241   X: 9381338-9381578 Caenorhabditis elegans
Exon244320   321   X: 9381624-9381944 Caenorhabditis elegans
Exon244326   204   X: 9382224-9382427 Caenorhabditis elegans
Exon244332   211   X: 9382476-9382686 Caenorhabditis elegans
Exon244338   140   X: 9382734-9382873 Caenorhabditis elegans
Exon244344   78   X: 9383014-9383091 Caenorhabditis elegans
Exon244350   455   X: 9385574-9386028 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01H11.1d.1 9364818 9386028 1

1 Sequence

Length
2587

1 Sequence Ontology Term

Identifier Name Description
transcript