WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1s.1 Sequence Name  C23F12.1s.1
Length (nt)  10743   Chromosome Location  X: 9397752-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1s.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1s C23F12.1s 10743   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1s.1 9397752 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

50 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244372   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244383   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244392   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244401   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244410   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244419   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244428   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244437   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244448   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244457   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244467   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244478   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244493   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244506   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244519   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244533   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244550   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244565   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244578   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244600   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244624   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244646   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244672   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244698   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244724   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244750   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244776   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244806   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244850   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244880   255   X: 9418609-9418863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1s.1 9397752 9426683 1

1 Sequence

Length
10743

1 Sequence Ontology Term

Identifier Name Description
transcript