WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1a.1 Sequence Name  C23F12.1a.1
Length (nt)  11450   Chromosome Location  X: 9397701-9427246
Chromosome . Primary Identifier  X Chromosome Location . Start  9397701
Chromosome Location . End  9427246 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1a C23F12.1a 10836   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1a.1 9397701 9427246 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

51 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244426   132   X: 9397701-9397832 Caenorhabditis elegans
Exon244436   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244445   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244454   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244463   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244472   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244481   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244490   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244501   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244510   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244520   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244530   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244542   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244555   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244568   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244582   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244597   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244612   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244625   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244643   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244664   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244686   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244710   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244736   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244760   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244786   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244812   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244840   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244868   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244884   1631   X: 9416924-9418554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1a.1 9397701 9427246 1

1 Sequence

Length
11450

1 Sequence Ontology Term

Identifier Name Description
transcript