WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1v.1 Sequence Name  C23F12.1v.1
Length (nt)  10659   Chromosome Location  X: 9397752-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9426683 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1v.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1v C23F12.1v 10659   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1v.1 9397752 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244431   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244442   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244451   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244460   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244469   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244478   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244487   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244496   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244507   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244516   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244526   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244537   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244552   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244565   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244578   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244592   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244609   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244637   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244659   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244683   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244705   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244731   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244757   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244783   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244809   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244835   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244865   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244909   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244939   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244968   183   X: 9418914-9419096 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1v.1 9397752 9426683 1

1 Sequence

Length
10659

1 Sequence Ontology Term

Identifier Name Description
transcript