WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.13a.1 Sequence Name  Y39G10AR.13a.1
Length (nt)  2076   Chromosome Location  I: 2304513-2306790
Chromosome . Primary Identifier  I Chromosome Location . Start  2304513
Chromosome Location . End  2306790 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002047 icp-1 Y39G10AR.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.13a Y39G10AR.13a 1869   I: 2304716-2304844

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.13a.1 2304513 2306790 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4185   332   I: 2304513-2304844 Caenorhabditis elegans
Exon4187   681   I: 2304899-2305579 Caenorhabditis elegans
Exon4189   789   I: 2305631-2306419 Caenorhabditis elegans
Exon4192   186   I: 2306470-2306655 Caenorhabditis elegans
Exon4193   88   I: 2306703-2306790 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.13a.1 2304513 2306790 -1

1 Sequence

Length
2076

1 Sequence Ontology Term

Identifier Name Description
transcript