WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G10AR.13a Sequence Name  Y39G10AR.13a
Length (nt)  1869   Chromosome Location  I: 2304716-2304844
Chromosome . Primary Identifier  I Chromosome Location . Start  2304716
Chromosome Location . End  2304844
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.13a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26991 ICP-1, isoform a 69.9 622 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00116250
WBRNAi00116252
WBRNAi00116251
WBRNAi00083324
WBRNAi00099960
WBRNAi00005003
WBRNAi00116249
WBRNAi00064165
WBRNAi00116244
WBRNAi00100867
WBRNAi00071092
WBRNAi00101230
WBRNAi00101268
WBRNAi00101287
WBRNAi00099354
WBRNAi00099556
WBRNAi00099758
WBRNAi00101249
WBRNAi00101148
WBRNAi00076783
WBRNAi00000125
WBRNAi00026674
WBRNAi00026675
WBRNAi00100119
WBRNAi00100306
WBRNAi00100493
WBRNAi00081330
WBRNAi00083329
WBRNAi00083328
WBRNAi00082239

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.13a 2304716 2304844 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002047 icp-1 Y39G10AR.13 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.13a 2304716 2304844 -1
CDS:Y39G10AR.13a 2304899 2305579 -1
CDS:Y39G10AR.13a 2305631 2306419 -1
CDS:Y39G10AR.13a 2306470 2306655 -1
CDS:Y39G10AR.13a 2306703 2306786 -1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G10AR.13a.1 Y39G10AR.13a.1 2076   I: 2304513-2306790