WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1i.1 Sequence Name  C23F12.1i.1
Length (nt)  7965   Chromosome Location  X: 9405390-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9405390
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1i C23F12.1i 7965   X: 9405390-9405479

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1i.1 9405390 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244541   90   X: 9405390-9405479 Caenorhabditis elegans
Exon244547   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244560   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244573   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244587   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244602   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244617   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244630   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244652   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244674   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244696   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244720   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244746   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244772   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244798   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244824   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244852   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244896   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244926   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244955   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244984   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245013   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245042   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245071   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245100   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245129   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245158   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245235   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245264   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245293   414   X: 9424473-9424886 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1i.1 9405390 9426683 1

1 Sequence

Length
7965

1 Sequence Ontology Term

Identifier Name Description
transcript