WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1k.1 Sequence Name  C23F12.1k.1
Length (nt)  7440   Chromosome Location  X: 9407289-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9407289
Chromosome Location . End  9426683 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1k C23F12.1k 7440   X: 9407289-9407301

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1k.1 9407289 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244596   13   X: 9407289-9407301 Caenorhabditis elegans
Exon244604   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244619   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244632   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244654   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244676   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244698   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244722   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244748   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244774   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244800   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244826   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244854   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244898   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244928   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244957   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244986   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245015   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245044   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245073   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245102   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245131   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245160   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245237   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245266   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245295   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245324   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245353   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245382   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245411   166   X: 9426076-9426241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1k.1 9407289 9426683 1

1 Sequence

Length
7440

1 Sequence Ontology Term

Identifier Name Description
transcript