WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1c.1 Sequence Name  C23F12.1c.1
Length (nt)  8331   Chromosome Location  X: 9409814-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9409814
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1c C23F12.1c 8331   X: 9409814-9409943

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1c.1 9409814 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244640   130   X: 9409814-9409943 Caenorhabditis elegans
Exon244644   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244665   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244687   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244711   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244737   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244761   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244787   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244813   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244841   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244869   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244885   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244914   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244943   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244972   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245001   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245030   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245059   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245088   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245117   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245146   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245175   81   X: 9422384-9422464 Caenorhabditis elegans
Exon245187   123   X: 9422512-9422634 Caenorhabditis elegans
Exon245199   711   X: 9422771-9423481 Caenorhabditis elegans
Exon245211   147   X: 9423532-9423678 Caenorhabditis elegans
Exon245223   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245252   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245281   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245310   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245339   147   X: 9425174-9425320 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1c.1 9409814 9426683 1

1 Sequence

Length
8331

1 Sequence Ontology Term

Identifier Name Description
transcript