WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1g.5 Sequence Name  C23F12.1g.5
Length (nt)  7711   Chromosome Location  X: 9412245-9427253
Chromosome . Primary Identifier  X Chromosome Location . Start  9412245
Chromosome Location . End  9427253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1g.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1g C23F12.1g 5670   X: 9417087-9418554

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.5 9412245 9427253 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244642   121   X: 9412245-9412365 Caenorhabditis elegans
Exon244672   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244694   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244718   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244744   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244768   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244794   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244820   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244848   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244873   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244892   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244922   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244951   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244980   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245009   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245038   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245067   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245096   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245125   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245154   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245231   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245260   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245289   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245318   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245347   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245376   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245405   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245452   855   X: 9426399-9427253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.5 9412245 9427253 1

1 Sequence

Length
7711

1 Sequence Ontology Term

Identifier Name Description
transcript