WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1m.1 Sequence Name  C23F12.1m.1
Length (nt)  7008   Chromosome Location  X: 9412285-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9412285
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1m C23F12.1m 7008   X: 9412285-9412365

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1m.1 9412285 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244663   81   X: 9412285-9412365 Caenorhabditis elegans
Exon244678   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244700   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244724   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244750   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244776   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244802   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244828   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244856   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244900   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244930   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244959   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244988   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245017   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245046   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245075   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245104   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245133   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245162   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245239   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245268   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245297   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245326   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245355   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245384   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245413   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245432   285   X: 9426399-9426683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1m.1 9412285 9426683 1

1 Sequence

Length
7008

1 Sequence Ontology Term

Identifier Name Description
transcript