WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1o.1 Sequence Name  C23F12.1o.1
Length (nt)  6816   Chromosome Location  X: 9413133-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9413133
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1o C23F12.1o 6816   X: 9413133-9413403

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1o.1 9413133 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244709   271   X: 9413133-9413403 Caenorhabditis elegans
Exon244726   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244752   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244778   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244804   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244830   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244858   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244902   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244932   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244961   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244990   203   X: 9419378-9419580 Caenorhabditis elegans
Exon245019   127   X: 9420406-9420532 Caenorhabditis elegans
Exon245048   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245077   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245106   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245135   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245164   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245241   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245270   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245299   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245328   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245357   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245386   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245415   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245434   285   X: 9426399-9426683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1o.1 9413133 9426683 1

1 Sequence

Length
6816

1 Sequence Ontology Term

Identifier Name Description
transcript