WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C55C2.5a Sequence Name  C55C2.5a
Length (nt)  1614   Chromosome Location  I: 2571988-2572039
Chromosome . Primary Identifier  I Chromosome Location . Start  2571988
Chromosome Location . End  2572039
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55C2.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37758 AAT-5, isoform a 59.5 537 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043239
WBRNAi00003248

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C55C2.5a 2571988 2572039 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000006 aat-5 C55C2.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C55C2.5a 2571988 2572039 -1
CDS:C55C2.5a 2572093 2572300 -1
CDS:C55C2.5a 2572356 2572519 -1
CDS:C55C2.5a 2572570 2572736 -1
CDS:C55C2.5a 2573741 2573941 -1
CDS:C55C2.5a 2573999 2574267 -1
CDS:C55C2.5a 2574313 2574444 -1
CDS:C55C2.5a 2574521 2574584 -1
CDS:C55C2.5a 2575439 2575629 -1
CDS:C55C2.5a 2575841 2576006 -1

1 Sequence

Length
1614

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C55C2.5a.1 C55C2.5a.1 1876   I: 2571740-2576020