WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8i.2 Sequence Name  ZK899.8i.2
Length (nt)  3775   Chromosome Location  X: 9487376-9516436
Chromosome . Primary Identifier  X Chromosome Location . Start  9487376
Chromosome Location . End  9516436 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8i ZK899.8i 2481   X: 9510538-9510725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK899.8i.2 9487376 9516436 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245503   67   X: 9487376-9487442 Caenorhabditis elegans
Exon245515   221   X: 9496541-9496761 Caenorhabditis elegans
Exon245522   60   X: 9497668-9497727 Caenorhabditis elegans
Exon245531   92   X: 9498111-9498202 Caenorhabditis elegans
Exon245547   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245560   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245576   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245591   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245608   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245624   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245640   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245656   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245672   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245688   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245704   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245720   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245737   640   X: 9515797-9516436 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK899.8i.2 9487376 9516436 1

1 Sequence

Length
3775

1 Sequence Ontology Term

Identifier Name Description
transcript