WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK899.8i Sequence Name  ZK899.8i
Length (nt)  2481   Chromosome Location  X: 9510538-9510725
Chromosome . Primary Identifier  X Chromosome Location . Start  9510538
Chromosome Location . End  9510725
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39119 GAP-2, isoform i 93.0 826 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00068204
WBRNAi00059822
WBRNAi00001742
WBRNAi00010371
WBRNAi00022228
WBRNAi00109592
WBRNAi00109203
WBRNAi00109301
WBRNAi00085686
WBRNAi00109495
WBRNAi00109398

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK899.8i 9510538 9510725 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK899.8i 9510538 9510725 1
CDS:ZK899.8i 9511028 9511162 1
CDS:ZK899.8i 9513131 9513356 1
CDS:ZK899.8i 9513420 9513763 1
CDS:ZK899.8i 9513812 9514150 1
CDS:ZK899.8i 9514304 9514564 1
CDS:ZK899.8i 9514709 9515083 1
CDS:ZK899.8i 9515137 9515329 1
CDS:ZK899.8i 9515374 9515543 1
CDS:ZK899.8i 9515589 9515745 1
CDS:ZK899.8i 9515797 9515889 1

1 Sequence

Length
2481

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK899.8i.2 ZK899.8i.2 3775   X: 9487376-9516436
Transcript:ZK899.8i.3 ZK899.8i.3 4182   X: 9490626-9516440
Transcript:ZK899.8i.4 ZK899.8i.4 3716   X: 9496540-9516443
Transcript:ZK899.8i.5 ZK899.8i.5 3626   X: 9502081-9516434
Transcript:ZK899.8i.1 ZK899.8i.1 3041   X: 9510525-9516436