WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8i.3 Sequence Name  ZK899.8i.3
Length (nt)  4182   Chromosome Location  X: 9490626-9516440
Chromosome . Primary Identifier  X Chromosome Location . Start  9490626
Chromosome Location . End  9516440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8i ZK899.8i 2481   X: 9510538-9510725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK899.8i.3 9490626 9516440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245505   470   X: 9490626-9491095 Caenorhabditis elegans
Exon245516   221   X: 9496541-9496761 Caenorhabditis elegans
Exon245523   60   X: 9497668-9497727 Caenorhabditis elegans
Exon245532   92   X: 9498111-9498202 Caenorhabditis elegans
Exon245548   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245561   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245577   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245592   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245609   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245625   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245641   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245657   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245673   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245689   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245705   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245721   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245739   644   X: 9515797-9516440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK899.8i.3 9490626 9516440 1

1 Sequence

Length
4182

1 Sequence Ontology Term

Identifier Name Description
transcript