WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8i.4 Sequence Name  ZK899.8i.4
Length (nt)  3716   Chromosome Location  X: 9496540-9516443
Chromosome . Primary Identifier  X Chromosome Location . Start  9496540
Chromosome Location . End  9516443 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8i ZK899.8i 2481   X: 9510538-9510725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.4 9496540 9516443 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245508   222   X: 9496540-9496761 Caenorhabditis elegans
Exon245524   60   X: 9497668-9497727 Caenorhabditis elegans
Exon245533   92   X: 9498111-9498202 Caenorhabditis elegans
Exon245549   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245562   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245578   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245593   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245610   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245626   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245642   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245658   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245674   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245690   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245706   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245722   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245741   647   X: 9515797-9516443 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.4 9496540 9516443 1

1 Sequence

Length
3716

1 Sequence Ontology Term

Identifier Name Description
transcript