WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8i.4 Sequence Name  ZK899.8i.4
Length (nt)  3716   Chromosome Location  X: 9496540-9516443
Chromosome . Primary Identifier  X Chromosome Location . Start  9496540
Chromosome Location . End  9516443 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8i ZK899.8i 2481   X: 9510538-9510725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.4 9496540 9516443 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245486   222   X: 9496540-9496761 Caenorhabditis elegans
Exon245502   60   X: 9497668-9497727 Caenorhabditis elegans
Exon245511   92   X: 9498111-9498202 Caenorhabditis elegans
Exon245527   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245540   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245556   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245571   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245588   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245604   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245620   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245636   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245652   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245668   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245684   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245700   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245719   647   X: 9515797-9516443 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.4 9496540 9516443 1

1 Sequence

Length
3716

1 Sequence Ontology Term

Identifier Name Description
transcript