WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8f.1 Sequence Name  ZK899.8f.1
Length (nt)  4291   Chromosome Location  X: 9500819-9516436
Chromosome . Primary Identifier  X Chromosome Location . Start  9500819
Chromosome Location . End  9516436 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8f ZK899.8f 2871   X: 9501692-9501774

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8f.1 9500819 9516436 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245570   956   X: 9500819-9501774 Caenorhabditis elegans
Exon245579   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245592   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245608   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245622   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245638   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245654   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245670   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245686   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245702   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245718   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245734   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245750   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245769   640   X: 9515797-9516436 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8f.1 9500819 9516436 1

1 Sequence

Length
4291

1 Sequence Ontology Term

Identifier Name Description
transcript