WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8i.5 Sequence Name  ZK899.8i.5
Length (nt)  3626   Chromosome Location  X: 9502081-9516434
Chromosome . Primary Identifier  X Chromosome Location . Start  9502081
Chromosome Location . End  9516434 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8i ZK899.8i 2481   X: 9510538-9510725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.5 9502081 9516434 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245572   293   X: 9502081-9502373 Caenorhabditis elegans
Exon245584   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245597   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245613   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245628   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245645   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245661   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245677   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245693   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245709   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245725   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245741   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245757   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245767   638   X: 9515797-9516434 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.5 9502081 9516434 1

1 Sequence

Length
3626

1 Sequence Ontology Term

Identifier Name Description
transcript