WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8i.1 Sequence Name  ZK899.8i.1
Length (nt)  3041   Chromosome Location  X: 9510525-9516436
Chromosome . Primary Identifier  X Chromosome Location . Start  9510525
Chromosome Location . End  9516436 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8i ZK899.8i 2481   X: 9510538-9510725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.1 9510525 9516436 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245560   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245568   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245585   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245601   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245617   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245633   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245649   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245665   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245681   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245697   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245714   640   X: 9515797-9516436 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8i.1 9510525 9516436 1

1 Sequence

Length
3041

1 Sequence Ontology Term

Identifier Name Description
transcript