WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8j.1 Sequence Name  ZK899.8j.1
Length (nt)  2927   Chromosome Location  X: 9512811-9516435
Chromosome . Primary Identifier  X Chromosome Location . Start  9512811
Chromosome Location . End  9516435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8j ZK899.8j 2373   X: 9512819-9513033

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8j.1 9512811 9516435 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245575   223   X: 9512811-9513033 Caenorhabditis elegans
Exon245590   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245606   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245622   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245638   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245654   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245670   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245686   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245702   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245712   639   X: 9515797-9516435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8j.1 9512811 9516435 1

1 Sequence

Length
2927

1 Sequence Ontology Term

Identifier Name Description
transcript