WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.5h.1 Sequence Name  F49E2.5h.1
Length (nt)  2538   Chromosome Location  X: 9552891-9559878
Chromosome . Primary Identifier  X Chromosome Location . Start  9552891
Chromosome Location . End  9559878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.5h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009888 F49E2.5 F49E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.5h F49E2.5h 2538   X: 9552891-9553000

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E2.5h.1 9552891 9559878 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245863   110   X: 9552891-9553000 Caenorhabditis elegans
Exon245881   88   X: 9553049-9553136 Caenorhabditis elegans
Exon245910   432   X: 9553451-9553882 Caenorhabditis elegans
Exon245939   222   X: 9553937-9554158 Caenorhabditis elegans
Exon245966   249   X: 9554299-9554547 Caenorhabditis elegans
Exon246064   90   X: 9556628-9556717 Caenorhabditis elegans
Exon246090   69   X: 9556766-9556834 Caenorhabditis elegans
Exon246125   189   X: 9557218-9557406 Caenorhabditis elegans
Exon246150   156   X: 9557795-9557950 Caenorhabditis elegans
Exon246176   424   X: 9558259-9558682 Caenorhabditis elegans
Exon246202   140   X: 9558956-9559095 Caenorhabditis elegans
Exon246228   120   X: 9559227-9559346 Caenorhabditis elegans
Exon246254   90   X: 9559478-9559567 Caenorhabditis elegans
Exon246280   75   X: 9559617-9559691 Caenorhabditis elegans
Exon246303   84   X: 9559795-9559878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E2.5h.1 9552891 9559878 1

1 Sequence

Length
2538

1 Sequence Ontology Term

Identifier Name Description
transcript