WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11E4.2.1 Sequence Name  C11E4.2.1
Length (nt)  797   Chromosome Location  X: 9587942-9588879
Chromosome . Primary Identifier  X Chromosome Location . Start  9587942
Chromosome Location . End  9588879 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11E4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007517 gpx-3 C11E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11E4.2 C11E4.2 675   X: 9587958-9588021

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.2.1 9587942 9588879 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246500   80   X: 9587942-9588021 Caenorhabditis elegans
Exon246501   156   X: 9588066-9588221 Caenorhabditis elegans
Exon246502   245   X: 9588268-9588512 Caenorhabditis elegans
Exon246503   316   X: 9588564-9588879 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.2.1 9587942 9588879 1

1 Sequence

Length
797

1 Sequence Ontology Term

Identifier Name Description
transcript