WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11E4.3a.1 Sequence Name  C11E4.3a.1
Length (nt)  1954   Chromosome Location  X: 9589423-9595713
Chromosome . Primary Identifier  X Chromosome Location . Start  9589423
Chromosome Location . End  9595713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11E4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007518 del-8 C11E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11E4.3a C11E4.3a 1662   X: 9589461-9589496

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.3a.1 9589423 9595713 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246504   74   X: 9589423-9589496 Caenorhabditis elegans
Exon246505   237   X: 9589722-9589958 Caenorhabditis elegans
Exon246507   134   X: 9590009-9590142 Caenorhabditis elegans
Exon246508   139   X: 9590185-9590323 Caenorhabditis elegans
Exon246509   144   X: 9590372-9590515 Caenorhabditis elegans
Exon246510   231   X: 9590948-9591178 Caenorhabditis elegans
Exon246512   201   X: 9591391-9591591 Caenorhabditis elegans
Exon246513   114   X: 9593925-9594038 Caenorhabditis elegans
Exon246514   61   X: 9594124-9594184 Caenorhabditis elegans
Exon246516   141   X: 9594237-9594377 Caenorhabditis elegans
Exon246519   478   X: 9595236-9595713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.3a.1 9589423 9595713 1

1 Sequence

Length
1954

1 Sequence Ontology Term

Identifier Name Description
transcript