WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11E4.6.1 Sequence Name  C11E4.6.1
Length (nt)  3979   Chromosome Location  X: 9610563-9617045
Chromosome . Primary Identifier  X Chromosome Location . Start  9610563
Chromosome Location . End  9617045 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11E4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007520 C11E4.6 C11E4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11E4.6 C11E4.6 3513   X: 9610576-9610700

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.6.1 9610563 9617045 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246527   138   X: 9610563-9610700 Caenorhabditis elegans
Exon246528   340   X: 9610748-9611087 Caenorhabditis elegans
Exon246529   231   X: 9611278-9611508 Caenorhabditis elegans
Exon246530   349   X: 9612024-9612372 Caenorhabditis elegans
Exon246531   315   X: 9612488-9612802 Caenorhabditis elegans
Exon246532   312   X: 9612851-9613162 Caenorhabditis elegans
Exon246533   129   X: 9613211-9613339 Caenorhabditis elegans
Exon246534   521   X: 9613578-9614098 Caenorhabditis elegans
Exon246535   171   X: 9614521-9614691 Caenorhabditis elegans
Exon246536   223   X: 9614762-9614984 Caenorhabditis elegans
Exon246537   131   X: 9615090-9615220 Caenorhabditis elegans
Exon246538   146   X: 9615345-9615490 Caenorhabditis elegans
Exon246539   244   X: 9615546-9615789 Caenorhabditis elegans
Exon246540   135   X: 9616274-9616408 Caenorhabditis elegans
Exon246541   594   X: 9616452-9617045 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.6.1 9610563 9617045 1

1 Sequence

Length
3979

1 Sequence Ontology Term

Identifier Name Description
transcript