WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10BL.2.1 Sequence Name  Y54E10BL.2.1
Length (nt)  922   Chromosome Location  I: 3010684-3011665
Chromosome . Primary Identifier  I Chromosome Location . Start  3010684
Chromosome Location . End  3011665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BL.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10BL.2 Y54E10BL.2 858   I: 3010690-3011428

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BL.2.1 3010684 3011665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5863   745   I: 3010684-3011428 Caenorhabditis elegans
Exon5864   177   I: 3011489-3011665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BL.2.1 3010684 3011665 1

1 Sequence

Length
922

1 Sequence Ontology Term

Identifier Name Description
transcript