WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10BL.2 Sequence Name  Y54E10BL.2
Length (nt)  858   Chromosome Location  I: 3010690-3011428
Chromosome . Primary Identifier  I Chromosome Location . Start  3010690
Chromosome Location . End  3011428
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BL.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25434 COL-48 27.9 285 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00066930
WBRNAi00067140
WBRNAi00072755
WBRNAi00072757
WBRNAi00075033
WBRNAi00075035
WBRNAi00075034
WBRNAi00075037
WBRNAi00075036
WBRNAi00075039
WBRNAi00075038
WBRNAi00004732
WBRNAi00004733
WBRNAi00037460
WBRNAi00080582
WBRNAi00075040
WBRNAi00072756
WBRNAi00085180
WBRNAi00027642
WBRNAi00061586

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BL.2 3010690 3011428 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BL.2 3010690 3011428 1
CDS:Y54E10BL.2 3011489 3011607 1

1 Sequence

Length
858

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10BL.2.1 Y54E10BL.2.1 922   I: 3010684-3011665