WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15G9.4a.1 Sequence Name  F15G9.4a.1
Length (nt)  15720   Chromosome Location  X: 9717626-9753761
Chromosome . Primary Identifier  X Chromosome Location . Start  9717626
Chromosome Location . End  9753761 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15G9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15G9.4a F15G9.4a 15528   X: 9717626-9717878

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F15G9.4a.1 9717626 9753761 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

62 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246701   253   X: 9717626-9717878 Caenorhabditis elegans
Exon246702   105   X: 9718376-9718480 Caenorhabditis elegans
Exon246707   644   X: 9719726-9720369 Caenorhabditis elegans
Exon246712   106   X: 9720451-9720556 Caenorhabditis elegans
Exon246717   322   X: 9720639-9720960 Caenorhabditis elegans
Exon246722   388   X: 9721113-9721500 Caenorhabditis elegans
Exon246727   172   X: 9721553-9721724 Caenorhabditis elegans
Exon246732   815   X: 9721808-9722622 Caenorhabditis elegans
Exon246737   124   X: 9722778-9722901 Caenorhabditis elegans
Exon246742   224   X: 9723064-9723287 Caenorhabditis elegans
Exon246747   399   X: 9723337-9723735 Caenorhabditis elegans
Exon246752   123   X: 9723913-9724035 Caenorhabditis elegans
Exon246757   783   X: 9724089-9724871 Caenorhabditis elegans
Exon246762   90   X: 9725124-9725213 Caenorhabditis elegans
Exon246767   88   X: 9725265-9725352 Caenorhabditis elegans
Exon246772   185   X: 9725411-9725595 Caenorhabditis elegans
Exon246777   103   X: 9725642-9725744 Caenorhabditis elegans
Exon246782   116   X: 9727241-9727356 Caenorhabditis elegans
Exon246787   109   X: 9727409-9727517 Caenorhabditis elegans
Exon246792   202   X: 9727646-9727847 Caenorhabditis elegans
Exon246797   160   X: 9727934-9728093 Caenorhabditis elegans
Exon246802   90   X: 9728142-9728231 Caenorhabditis elegans
Exon246807   961   X: 9728698-9729658 Caenorhabditis elegans
Exon246812   202   X: 9729827-9730028 Caenorhabditis elegans
Exon246817   380   X: 9730088-9730467 Caenorhabditis elegans
Exon246822   391   X: 9730719-9731109 Caenorhabditis elegans
Exon246827   244   X: 9731387-9731630 Caenorhabditis elegans
Exon246832   318   X: 9731904-9732221 Caenorhabditis elegans
Exon246838   178   X: 9732494-9732671 Caenorhabditis elegans
Exon246843   279   X: 9732718-9732996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F15G9.4a.1 9717626 9753761 1

1 Sequence

Length
15720

1 Sequence Ontology Term

Identifier Name Description
transcript