WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15G9.4f.1 Sequence Name  F15G9.4f.1
Length (nt)  15234   Chromosome Location  X: 9718417-9753569
Chromosome . Primary Identifier  X Chromosome Location . Start  9718417
Chromosome Location . End  9753569 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15G9.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15G9.4f F15G9.4f 15234   X: 9718417-9718480

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F15G9.4f.1 9718417 9753569 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

61 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246762   64   X: 9718417-9718480 Caenorhabditis elegans
Exon246767   644   X: 9719726-9720369 Caenorhabditis elegans
Exon246772   106   X: 9720451-9720556 Caenorhabditis elegans
Exon246777   322   X: 9720639-9720960 Caenorhabditis elegans
Exon246782   388   X: 9721113-9721500 Caenorhabditis elegans
Exon246787   172   X: 9721553-9721724 Caenorhabditis elegans
Exon246792   815   X: 9721808-9722622 Caenorhabditis elegans
Exon246797   124   X: 9722778-9722901 Caenorhabditis elegans
Exon246802   224   X: 9723064-9723287 Caenorhabditis elegans
Exon246807   399   X: 9723337-9723735 Caenorhabditis elegans
Exon246812   123   X: 9723913-9724035 Caenorhabditis elegans
Exon246817   783   X: 9724089-9724871 Caenorhabditis elegans
Exon246822   90   X: 9725124-9725213 Caenorhabditis elegans
Exon246827   88   X: 9725265-9725352 Caenorhabditis elegans
Exon246832   185   X: 9725411-9725595 Caenorhabditis elegans
Exon246837   103   X: 9725642-9725744 Caenorhabditis elegans
Exon246842   116   X: 9727241-9727356 Caenorhabditis elegans
Exon246847   109   X: 9727409-9727517 Caenorhabditis elegans
Exon246852   202   X: 9727646-9727847 Caenorhabditis elegans
Exon246857   160   X: 9727934-9728093 Caenorhabditis elegans
Exon246862   90   X: 9728142-9728231 Caenorhabditis elegans
Exon246867   961   X: 9728698-9729658 Caenorhabditis elegans
Exon246872   202   X: 9729827-9730028 Caenorhabditis elegans
Exon246877   380   X: 9730088-9730467 Caenorhabditis elegans
Exon246882   391   X: 9730719-9731109 Caenorhabditis elegans
Exon246887   244   X: 9731387-9731630 Caenorhabditis elegans
Exon246892   318   X: 9731904-9732221 Caenorhabditis elegans
Exon246898   178   X: 9732494-9732671 Caenorhabditis elegans
Exon246903   279   X: 9732718-9732996 Caenorhabditis elegans
Exon246908   113   X: 9733044-9733156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F15G9.4f.1 9718417 9753569 1

1 Sequence

Length
15234

1 Sequence Ontology Term

Identifier Name Description
transcript