WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47A4.1b Sequence Name  F47A4.1b
Length (nt)  1287   Chromosome Location  X: 9801474-9801544
Chromosome . Primary Identifier  X Chromosome Location . Start  9801474
Chromosome Location . End  9801544
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47A4.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31524 LGC-47, isoform b 49.8 428 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00047589
WBRNAi00015140

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47A4.1b 9801474 9801544 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009799 lgc-47 F47A4.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47A4.1b 9801474 9801544 -1
CDS:F47A4.1b 9802103 9802212 -1
CDS:F47A4.1b 9802262 9802366 -1
CDS:F47A4.1b 9802463 9802562 -1
CDS:F47A4.1b 9803901 9804066 -1
CDS:F47A4.1b 9804500 9804604 -1
CDS:F47A4.1b 9804714 9804832 -1
CDS:F47A4.1b 9805780 9805909 -1
CDS:F47A4.1b 9805960 9806024 -1
CDS:F47A4.1b 9806086 9806243 -1
CDS:F47A4.1b 9806922 9807029 -1
CDS:F47A4.1b 9807429 9807478 -1

1 Sequence

Length
1287

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47A4.1b.1 F47A4.1b.1 1287   X: 9801474-9807478