WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B1.11.1 Sequence Name  R07B1.11.1
Length (nt)  487   Chromosome Location  X: 9856918-9858136
Chromosome . Primary Identifier  X Chromosome Location . Start  9856918
Chromosome Location . End  9858136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B1.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011082 R07B1.11 R07B1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B1.11 R07B1.11 363   X: 9856955-9857097

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B1.11.1 9856918 9858136 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247242   180   X: 9856918-9857097 Caenorhabditis elegans
Exon247243   132   X: 9857722-9857853 Caenorhabditis elegans
Exon247244   175   X: 9857962-9858136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B1.11.1 9856918 9858136 1

1 Sequence

Length
487

1 Sequence Ontology Term

Identifier Name Description
transcript