WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21G4.6b.1 Sequence Name  F21G4.6b.1
Length (nt)  6021   Chromosome Location  X: 9908914-9917444
Chromosome . Primary Identifier  X Chromosome Location . Start  9908914
Chromosome Location . End  9917444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21G4.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009027 htt-1 F21G4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21G4.6b F21G4.6b 6021   X: 9908914-9909054

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F21G4.6b.1 9908914 9917444 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247370   141   X: 9908914-9909054 Caenorhabditis elegans
Exon247375   172   X: 9909106-9909277 Caenorhabditis elegans
Exon247381   154   X: 9909419-9909572 Caenorhabditis elegans
Exon247387   224   X: 9909618-9909841 Caenorhabditis elegans
Exon247393   295   X: 9909888-9910182 Caenorhabditis elegans
Exon247399   238   X: 9910287-9910524 Caenorhabditis elegans
Exon247405   108   X: 9910571-9910678 Caenorhabditis elegans
Exon247411   539   X: 9911039-9911577 Caenorhabditis elegans
Exon247417   382   X: 9911625-9912006 Caenorhabditis elegans
Exon247423   110   X: 9912054-9912163 Caenorhabditis elegans
Exon247428   130   X: 9912539-9912668 Caenorhabditis elegans
Exon247434   136   X: 9912717-9912852 Caenorhabditis elegans
Exon247439   270   X: 9912912-9913181 Caenorhabditis elegans
Exon247445   157   X: 9913249-9913405 Caenorhabditis elegans
Exon247451   124   X: 9913449-9913572 Caenorhabditis elegans
Exon247457   471   X: 9913615-9914085 Caenorhabditis elegans
Exon247463   135   X: 9914136-9914270 Caenorhabditis elegans
Exon247469   345   X: 9914433-9914777 Caenorhabditis elegans
Exon247475   218   X: 9914825-9915042 Caenorhabditis elegans
Exon247481   279   X: 9915091-9915369 Caenorhabditis elegans
Exon247487   120   X: 9915534-9915653 Caenorhabditis elegans
Exon247493   307   X: 9915704-9916010 Caenorhabditis elegans
Exon247499   171   X: 9916054-9916224 Caenorhabditis elegans
Exon247505   135   X: 9916272-9916406 Caenorhabditis elegans
Exon247511   114   X: 9916572-9916685 Caenorhabditis elegans
Exon247517   157   X: 9916732-9916888 Caenorhabditis elegans
Exon247523   137   X: 9916938-9917074 Caenorhabditis elegans
Exon247529   108   X: 9917122-9917229 Caenorhabditis elegans
Exon247534   144   X: 9917301-9917444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F21G4.6b.1 9908914 9917444 -1

1 Sequence

Length
6021

1 Sequence Ontology Term

Identifier Name Description
transcript