WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F21G4.6c.1 Sequence Name  F21G4.6c.1
Length (nt)  6027   Chromosome Location  X: 9908914-9917444
Chromosome . Primary Identifier  X Chromosome Location . Start  9908914
Chromosome Location . End  9917444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F21G4.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009027 htt-1 F21G4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F21G4.6c F21G4.6c 6027   X: 9908914-9909054

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F21G4.6c.1 9908914 9917444 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247371   141   X: 9908914-9909054 Caenorhabditis elegans
Exon247376   172   X: 9909106-9909277 Caenorhabditis elegans
Exon247382   154   X: 9909419-9909572 Caenorhabditis elegans
Exon247388   224   X: 9909618-9909841 Caenorhabditis elegans
Exon247394   295   X: 9909888-9910182 Caenorhabditis elegans
Exon247400   238   X: 9910287-9910524 Caenorhabditis elegans
Exon247406   108   X: 9910571-9910678 Caenorhabditis elegans
Exon247412   539   X: 9911039-9911577 Caenorhabditis elegans
Exon247418   382   X: 9911625-9912006 Caenorhabditis elegans
Exon247424   110   X: 9912054-9912163 Caenorhabditis elegans
Exon247429   130   X: 9912539-9912668 Caenorhabditis elegans
Exon247435   136   X: 9912717-9912852 Caenorhabditis elegans
Exon247440   270   X: 9912912-9913181 Caenorhabditis elegans
Exon247446   157   X: 9913249-9913405 Caenorhabditis elegans
Exon247452   124   X: 9913449-9913572 Caenorhabditis elegans
Exon247458   471   X: 9913615-9914085 Caenorhabditis elegans
Exon247464   135   X: 9914136-9914270 Caenorhabditis elegans
Exon247470   345   X: 9914433-9914777 Caenorhabditis elegans
Exon247476   218   X: 9914825-9915042 Caenorhabditis elegans
Exon247482   279   X: 9915091-9915369 Caenorhabditis elegans
Exon247488   120   X: 9915534-9915653 Caenorhabditis elegans
Exon247494   307   X: 9915704-9916010 Caenorhabditis elegans
Exon247500   171   X: 9916054-9916224 Caenorhabditis elegans
Exon247506   135   X: 9916272-9916406 Caenorhabditis elegans
Exon247514   120   X: 9916572-9916691 Caenorhabditis elegans
Exon247518   157   X: 9916732-9916888 Caenorhabditis elegans
Exon247524   137   X: 9916938-9917074 Caenorhabditis elegans
Exon247530   108   X: 9917122-9917229 Caenorhabditis elegans
Exon247535   144   X: 9917301-9917444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F21G4.6c.1 9908914 9917444 -1

1 Sequence

Length
6027

1 Sequence Ontology Term

Identifier Name Description
transcript