WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G1.3a.1 Sequence Name  C17G1.3a.1
Length (nt)  1759   Chromosome Location  X: 9922862-9925173
Chromosome . Primary Identifier  X Chromosome Location . Start  9922862
Chromosome Location . End  9925173 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G1.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007650 ugt-23 C17G1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G1.3a C17G1.3a 1593   X: 9922943-9923123

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.3a.1 9922862 9925173 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247548   262   X: 9922862-9923123 Caenorhabditis elegans
Exon247550   96   X: 9923166-9923261 Caenorhabditis elegans
Exon247552   137   X: 9923306-9923442 Caenorhabditis elegans
Exon247554   226   X: 9923508-9923733 Caenorhabditis elegans
Exon247556   230   X: 9923838-9924067 Caenorhabditis elegans
Exon247558   353   X: 9924119-9924471 Caenorhabditis elegans
Exon247561   220   X: 9924657-9924876 Caenorhabditis elegans
Exon247562   235   X: 9924939-9925173 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.3a.1 9922862 9925173 -1

1 Sequence

Length
1759

1 Sequence Ontology Term

Identifier Name Description
transcript