WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC506.4d.1 Sequence Name  ZC506.4d.1
Length (nt)  2592   Chromosome Location  X: 9968629-9973010
Chromosome . Primary Identifier  X Chromosome Location . Start  9968629
Chromosome Location . End  9973010 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC506.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003232 mgl-1 ZC506.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC506.4d ZC506.4d 2592   X: 9968629-9968788

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC506.4d.1 9968629 9973010 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247693   160   X: 9968629-9968788 Caenorhabditis elegans
Exon247699   146   X: 9969191-9969336 Caenorhabditis elegans
Exon247703   248   X: 9969386-9969633 Caenorhabditis elegans
Exon247707   73   X: 9969676-9969748 Caenorhabditis elegans
Exon247711   259   X: 9969791-9970049 Caenorhabditis elegans
Exon247715   239   X: 9970339-9970577 Caenorhabditis elegans
Exon247719   102   X: 9970619-9970720 Caenorhabditis elegans
Exon247724   164   X: 9970778-9970941 Caenorhabditis elegans
Exon247728   148   X: 9970990-9971137 Caenorhabditis elegans
Exon247732   97   X: 9971183-9971279 Caenorhabditis elegans
Exon247737   372   X: 9971651-9972022 Caenorhabditis elegans
Exon247741   115   X: 9972101-9972215 Caenorhabditis elegans
Exon247745   110   X: 9972331-9972440 Caenorhabditis elegans
Exon247749   189   X: 9972486-9972674 Caenorhabditis elegans
Exon247753   110   X: 9972797-9972906 Caenorhabditis elegans
Exon247754   60   X: 9972951-9973010 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC506.4d.1 9968629 9973010 -1

1 Sequence

Length
2592

1 Sequence Ontology Term

Identifier Name Description
transcript