WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42G10.2.1 Sequence Name  F42G10.2.1
Length (nt)  1570   Chromosome Location  X: 10027856-10030130
Chromosome . Primary Identifier  X Chromosome Location . Start  10027856
Chromosome Location . End  10030130 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42G10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003368 mkk-4 F42G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42G10.2 F42G10.2 1092   X: 10027861-10027985

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42G10.2.1 10027856 10030130 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247863   130   X: 10027856-10027985 Caenorhabditis elegans
Exon247864   160   X: 10028039-10028198 Caenorhabditis elegans
Exon247865   123   X: 10028243-10028365 Caenorhabditis elegans
Exon247866   120   X: 10028479-10028598 Caenorhabditis elegans
Exon247867   180   X: 10028645-10028824 Caenorhabditis elegans
Exon247868   69   X: 10029077-10029145 Caenorhabditis elegans
Exon247869   66   X: 10029190-10029255 Caenorhabditis elegans
Exon247870   86   X: 10029306-10029391 Caenorhabditis elegans
Exon247871   66   X: 10029446-10029511 Caenorhabditis elegans
Exon247872   570   X: 10029561-10030130 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42G10.2.1 10027856 10030130 1

1 Sequence

Length
1570

1 Sequence Ontology Term

Identifier Name Description
transcript