WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC374.2.1 Sequence Name  ZC374.2.1
Length (nt)  2366   Chromosome Location  X: 10034607-10047425
Chromosome . Primary Identifier  X Chromosome Location . Start  10034607
Chromosome Location . End  10047425 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC374.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013872 ZC374.2 ZC374.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC374.2 ZC374.2 2025   X: 10034836-10034937

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC374.2.1 10034607 10047425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247892   331   X: 10034607-10034937 Caenorhabditis elegans
Exon247893   134   X: 10035178-10035311 Caenorhabditis elegans
Exon247894   127   X: 10035934-10036060 Caenorhabditis elegans
Exon247895   80   X: 10036113-10036192 Caenorhabditis elegans
Exon247896   114   X: 10036393-10036506 Caenorhabditis elegans
Exon247897   166   X: 10037367-10037532 Caenorhabditis elegans
Exon247898   137   X: 10038889-10039025 Caenorhabditis elegans
Exon247899   89   X: 10039477-10039565 Caenorhabditis elegans
Exon247900   100   X: 10040285-10040384 Caenorhabditis elegans
Exon247901   117   X: 10040511-10040627 Caenorhabditis elegans
Exon247902   136   X: 10041894-10042029 Caenorhabditis elegans
Exon247903   68   X: 10042681-10042748 Caenorhabditis elegans
Exon247904   313   X: 10044560-10044872 Caenorhabditis elegans
Exon247905   72   X: 10046328-10046399 Caenorhabditis elegans
Exon247906   128   X: 10046754-10046881 Caenorhabditis elegans
Exon247907   254   X: 10047172-10047425 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC374.2.1 10034607 10047425 -1

1 Sequence

Length
2366

1 Sequence Ontology Term

Identifier Name Description
transcript